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The reliability of multiple sequence alignment (MSA) results directly determines the credibility of the conclusions drawn from biological research. However, MSA is inherently an NP-hard problem, ...

GASAL2‑Py — Fast GPU Semi‑Global Alignment with Python Bindings GASAL2-Py is the Python interface to GASAL2, a CUDA GPU library for DNA/RNA sequence alignment Description This project provides Python ...

1 Image and Signal Processing Group, Institute for Computer Science, Leipzig University, Leipzig, Germany 2 Center for Scalable Data Analytics and Artificial Intelligence (ScaDS.AI) Dresden/Leipzig, ...

Abstract: Pairwise sequence alignment is one of the most fundamental and computationally intensive steps in genome analysis. With the improving costs and throughput of third-generation sequencing ...

Abstract: Sequence alignment is a method of positioning two (Pairwise Alignment) or more (Multiple Sequence Alignment) biological sequences of characters (such as DNA, RNA, or Protein sequences) in ...

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Construct library for human genome. Break whole genome sequence into 11 bases length words overlappedly (respectively for each chromosome), every word as a name of a txt file which contain all ...